![]() With the integration of sequence chromatograph viewing and editing of DNA sequences/alignments (new in version 2) Geneious is now firmly embedded in my research practices. If you are looking for a piece of bioinformatics software for teaching purposes look no further than Geneious. Students did a Genbank search, downloaded files, did an alignment and built a phylogenetic tree (with bootstrapping) all in the blink of an eye. Earlier this year I used the Beta-release in some undergraduate teaching labs - with great success. While the software has some “bell and whistles” for more complex tasks one of its key attributes is a simple user interface. The user interface of Geneious is both attractive and intuitive. The software logo “research in a flash” accurately describe the potential of Geneious - only months after its release it has become the “Swiss army knife” of bioinformatics software. ![]() Current and future releases of Geneious (offer a solution to (most) of these frustrations. Chopping and changing between different file formats and at times different operating systems (Mac, PC, Unix/Linux) has been a frustrating and time-consuming exercise. On an ending note, CLC Sequence Viewer is a well put-together piece designed to make bioinformatics more approachable, what with its set of features allowing you to explore various scenarios and perform analyses in a user-friendly user interface complemented by a thoroughly documented user manual.For a long time scientists who generate or analyse DNA sequences have been using multiple pieces of software to: 1) view chromatographs, 2) trim sequences 3) Blast data 4) align sequences 5) build phylogenetic trees. As such, your data input benefits from full integration, not to mention that results can be effortlessly calculated and exported. There is no need to worry about manual data transfers and turn to lots of programs and databases since tCLC Sequence Viewer helps you complete most of the tasks within its GUI. It is also worth pointing out that an impressive number of research tools are integrated, and reports can be generated so that you keep track of molecular weight, composition, and iso electric point. What’s more, reverse complements can be created, and shuffle sequences are supported as well. To be more specific, it can handle multiple alignments of RNA, DNA, and proteins, it is able to determine and manage consensus sequences, and it can also carry out genetic translations. Sports a neat, feature-packed GUIĪs said, the purpose the application serves is to help you try your hand at various basic bioinformatics analyses. Then, a view area allows you to handle one or more tabs at a time, with the side panel enabling you to make adjustments to the tab you are currently working in. What’s more, those who might feel intimidated by the program’s full-featured nature could rest assured that a well-documented user manual is also available for them to browse through in order to make the most of it.įiles are sorted in a navigation area, and just below, a toolbox is included. ![]() The first thing that stands out when opening CLC Sequence Viewer is the impressive number of features packed in the GUI, which still manages to feel uncluttered and user-friendly. Helps you perform bioinformatics analyses The program provides you with all-encompassing functionality so that you can also manage data, view graphics, and choose from a multitude of options when it comes to output formats. If bioinformatics is your field, and you require a powerful software solution to help you carry out thorough analyses, CLC Sequence Viewer might be up to the task.
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